380563Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Arielulus金背伏翼屬torquatusArielulus torquatus(Gabor & Lee, 1999)黃頸蝠;黃喉家蝠;黃喉黑伏翼1000432675Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Barbastella寬耳蝠屬darjelingensisBarbastella darjelingensis(Dobson, 1975)東方寬耳蝠;寬耳蝠;臺灣寬耳蝠;印度寬耳蝠;台灣寬耳蝠0000432776Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Eptesicus棕蝠屬pachyomussubsp.horikawaiEptesicus pachyomus horikawaiTomes, 1857堀川氏棕蝠;棕蝠1000380566Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Harpiocephalus毛翼管鼻蝠屬harpiaHarpiocephalus harpia(Temminck, 1840)毛翼管鼻蝠;毛翼大管鼻蝠;大管鼻蝠0000416111Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Harpiola毛翼蝠屬isodonHarpiola isodonKuo, Fang, Csorba & Lee, 2006金芒管鼻蝠0000416112Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Hypsugo高級伏翼屬pulveratusHypsugo pulveratus(Peters, 1870)灰伏翼0000432677Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Kerivoula彩蝠屬furvaKerivoula furvaKuo, Soisook, Ho, Csorba, Wang, & Rossiter 2017玄彩蝠;臺灣彩蝠;彩蝠;台灣彩蝠0000416113Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Murina管鼻蝠屬bicolorMurina bicolorKuo, Fang, Csorba & Lee, 2009黃胸管鼻蝠1000401693Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Murina管鼻蝠屬gracilisMurina gracilisKuo, Fang, Csorba & Lee, 2009姬管鼻蝠1000380568Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Murina管鼻蝠屬putaMurina putaKishida, 1924臺灣管鼻蝠;管鼻蝠;台灣管鼻蝠1000416114Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Murina管鼻蝠屬reconditaMurina reconditaKuo, Fang, Csorba & Lee, 2009隱姬管鼻蝠1000430164Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬fimbriatussubsp.taiwanensisMyotis fimbriatus taiwanensis(Peters, 1870)台灣毛腿鼠耳蝠;臺灣鼠耳蝠;毛腿鼠耳蝠;台灣鼠耳蝠;臺灣毛腿鼠耳蝠1000401691Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬formosussubsp.flavusMyotis formosus flavus(Hodgson, 1835)金黃鼠耳蝠;緋鼠耳蝠1000401690Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬fraterMyotis fraterAllen, 1923長尾鼠耳蝠0000380572Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬lanigerMyotis laniger(Peters, 1870)華南水鼠耳蝠;白腹鼠耳蝠;高山鼠耳蝠0000438410Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬pilosusMyotis pilosus(Peters, 1869)大足鼠耳蝠0000380570Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬rufonigerMyotis rufonigerKishida, 1924赤黑鼠耳蝠;渡瀨氏鼠耳蝠;黑支蝙蝠0000401689Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬secundusMyotis secundusRuedi, M., Csorba, G., Lin, L.-K. & Chou, C.-H., 2015長趾鼠耳蝠;長趾寬吻鼠耳蝠1000430165Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Myotis鼠耳蝠屬sororMyotis sororRuedi, M., Csorba, G., Lin, L.-K. & Chou, C.-H., 2015紅棕鼠耳蝠1000401697Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Nyctalus夜蝠屬plancyisubsp.velutinusNyctalus plancyi velutinusG. Allen, 1923絨山蝠;中華山蝠0000380575Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Pipistrellus家蝠屬abramusPipistrellus abramus(Temminck, 1835)東亞家蝠0000401695Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Pipistrellus家蝠屬montanusPipistrellus montanus山家蝠1000401696Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Pipistrellus家蝠屬taiwanensisPipistrellus taiwanensis臺灣家蝠;台灣家蝠0000380576Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Plecotus長耳蝠屬taivanusPlecotus taivanusYoshiyuki, 1991臺灣長耳蝠;台灣長耳蝠1000380577Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Scotophilus黃蝠屬kuhliiScotophilus kuhliiLeach, 1822高頭蝠;小黃蝠0000430163Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Submyotodon低齒丘鼠耳蝠屬latirostrisSubmyotodon latirostris(Kishida, 1932)寬吻鼠耳蝠1000380578Animalia動物界Chordata脊索動物門Mammalia哺乳綱Chiroptera翼手目Vespertilionidae蝙蝠科Vespertilio蝙蝠屬sinensisVespertilio sinensisPeters, 1880霜毛蝠0000